Early View e9087
SPECIAL ISSUE PERSPECTIVE

The European Bioinformatics Community for Mass Spectrometry (EuBIC-MS): an open community for bioinformatics training and research

Wout Bittremieux

Wout Bittremieux

European Bioinformatics Community for Mass Spectrometry, Belgium

University of California San Diego, La Jolla, CA, USA

University of Antwerp, Antwerp, Belgium

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David Bouyssié

David Bouyssié

European Bioinformatics Community for Mass Spectrometry, Belgium

IPBS, University of Toulouse, CNRS, UPS, Toulouse, France

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Viktoria Dorfer

Viktoria Dorfer

European Bioinformatics Community for Mass Spectrometry, Belgium

Bioinformatics Research Group, University of Applied Sciences Upper Austria, Hagenberg, Austria

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Marie Locard-Paulet

Marie Locard-Paulet

European Bioinformatics Community for Mass Spectrometry, Belgium

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark

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Yasset Perez-Riverol

Yasset Perez-Riverol

European Bioinformatics Community for Mass Spectrometry, Belgium

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD UK

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Veit Schwämmle

Veit Schwämmle

European Bioinformatics Community for Mass Spectrometry, Belgium

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark

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Julian Uszkoreit

Julian Uszkoreit

European Bioinformatics Community for Mass Spectrometry, Belgium

Center for Protein Diagnostics (PRODI), Medical Proteome Analysis, Ruhr University Bochum, Bochum, Germany

Medical Faculty, Medizinisches Proteom-Center, Ruhr University Bochum, Bochum, Germany

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Tim Van Den Bossche

Corresponding Author

Tim Van Den Bossche

European Bioinformatics Community for Mass Spectrometry, Belgium

VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium

Department of Biomolecular Medicine, Ghent University, Ghent, Belgium

Correspondence

T. Van Den Bossche, VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium.

Email: [email protected]

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First published: 16 April 2021
Citations: 2

Abstract

The European Bioinformatics Community for Mass Spectrometry (EuBIC-MS; eubic-ms.org) was founded in 2014 to unite European computational mass spectrometry researchers and proteomics bioinformaticians working in academia and industry. EuBIC-MS maintains educational resources (proteomics-academy.org) and organises workshops at national and international conferences on proteomics and mass spectrometry. Furthermore, EuBIC-MS is actively involved in several community initiatives such as the Human Proteome Organization's Proteomics Standards Initiative (HUPO-PSI). Apart from these collaborations, EuBIC-MS has organised two Winter Schools and two Developers' Meetings that have contributed to the strengthening of the European mass spectrometry network and fostered international collaboration in this field, even beyond Europe. Moreover, EuBIC-MS is currently actively developing a community-driven standard dedicated to mass spectrometry data annotation (SDRF-Proteomics) that will facilitate data reuse and collaboration. This manuscript highlights what EuBIC-MS is, what it does, and what it already has achieved. A warm invitation is extended to new researchers at all career stages to join the EuBIC-MS community on its Slack channel (eubic.slack.com).

PEER REVIEW

The peer review history for this article is available at https://publons.com/publon/10.1002/rcm.9087.