Volume 56, Issue 6 pp. 520-528
SPECIAL ISSUE RESEARCH ARTICLE

The C6H6 NMR repository: An integral solution to control the flow of your data from the magnet to the public

Luc Patiny

Luc Patiny

Institute of Chemical Sciences and Engineering, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, CH-1015 Switzerland

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Michaël Zasso

Michaël Zasso

Institut de Police Scientifique, Ecole des Sciences Criminelles, University of Lausanne, Lausanne, CH-1015 Switzerland

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Daniel Kostro

Daniel Kostro

Institut de Police Scientifique, Ecole des Sciences Criminelles, University of Lausanne, Lausanne, CH-1015 Switzerland

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Andrés Bernal

Andrés Bernal

Departamento de Ciencias Básicas y Modelado, Universidad Jorge Tadeo Lozano, Bogotá, Colombia

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Andrés M. Castillo

Andrés M. Castillo

Escuela de Ingeniería de Sistemas y Computación, Universidad del Valle, Cali, Valle, Colombia

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Alejandro Bolaños

Alejandro Bolaños

Chemistry Department, Universidad del Valle, Cali, Valle, Colombia

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Miguel A. Asencio

Miguel A. Asencio

Institute of Chemical Sciences and Engineering, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, CH-1015 Switzerland

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Norman Pellet

Norman Pellet

Institute of Chemical Sciences and Engineering, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, CH-1015 Switzerland

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Matthew Todd

Matthew Todd

School of Chemistry, The University of Sydney, Sydney, 2006 NSW, Australia

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Nils Schloerer

Nils Schloerer

Department of Chemistry, University of Cologne, Köln, Germany

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Stefan Kuhn

Stefan Kuhn

Department of Chemistry, University of Cologne, Köln, Germany

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Elaine Holmes

Elaine Holmes

Division of Computational and Systems Medicine, Imperial College, London, UK

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Sacha Javor

Sacha Javor

Department of Chemistry and Biochemistry, University of Bern, Bern, 3012 Switzerland

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Julien Wist

Corresponding Author

Julien Wist

Chemistry Department, Universidad del Valle, Cali, Valle, Colombia

Correspondence

Julien Wist, Chemistry Department, Universidad del Valle, A.A. 25360, Cali, Valle, Colombia.

Email: [email protected]

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First published: 05 October 2017
Citations: 15

Abstract

NMR is a mature technique that is well established and adopted in a wide range of research facilities from laboratories to hospitals. This accounts for large amounts of valuable experimental data that may be readily exported into a standard and open format. Yet the publication of these data faces an important issue: Raw data are not made available; instead, the information is slimed down into a string of characters (the list of peaks). Although historical limitations of technology explain this practice, it is not acceptable in the era of Internet. The idea of modernizing the strategy for sharing NMR data is not new, and some repositories exist, but sharing raw data is still not an established practice. Here, we present a powerful toolbox built on recent technologies that runs inside the browser and provides a means to store, share, analyse, and interact with original NMR data. Stored spectra can be streamlined into the publication pipeline, to improve the revision process for instance. The set of tools is still basic but is intended to be extended. The project is open source under the Massachusetts Institute of Technology (MIT) licence.